Initial release of hdf5 for HPC (v1.10.1, gcc, non-mpi/openmpi/mvapich2)

Announcement ID: SUSE-RU-2017:3002-1
Rating: moderate
References:
Affected Products:
  • HPC Module 12
  • SUSE Linux Enterprise High Performance Computing 12 SP2
  • SUSE Linux Enterprise High Performance Computing 12 SP3
  • SUSE Linux Enterprise High Performance Computing 12 SP4
  • SUSE Linux Enterprise High Performance Computing 12 SP5
  • SUSE Linux Enterprise Server 12 SP2
  • SUSE Linux Enterprise Server 12 SP3
  • SUSE Linux Enterprise Server 12 SP4
  • SUSE Linux Enterprise Server 12 SP5
  • SUSE Linux Enterprise Server for SAP Applications 12 SP2
  • SUSE Linux Enterprise Server for SAP Applications 12 SP3
  • SUSE Linux Enterprise Server for SAP Applications 12 SP4
  • SUSE Linux Enterprise Server for SAP Applications 12 SP5

An update that has two fixes can now be installed.

Description:

This update introduces hdf5 version 1.10.1 built for environment modules to the HPC Module. This is supported for use without (FATE#321710) and with MPI (FATE#321717).

HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data. HDF5 is portable and is extensible, allowing applications to evolve in their use of HDF5.

The HDF5 technology suite is designed to organize, store, discover, access, analyze, share, and preserve diverse, complex data in continuously evolving heterogeneous computing and storage environments.

Patch Instructions:

To install this SUSE update use the SUSE recommended installation methods like YaST online_update or "zypper patch".
Alternatively you can run the command listed for your product:

  • HPC Module 12
    zypper in -t patch SUSE-SLE-Module-HPC-12-2017-1856=1

Package List:

  • HPC Module 12 (aarch64 x86_64)
    • libhdf5hl_fortran_1_10_1-gnu-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5hl_fortran_1_10_1-gnu-openmpi1-hpc-debuginfo-1.10.1-3.8.1
    • hdf5-debuginfo-1.10.1-3.8.1
    • hdf5-devel-debuginfo-1.10.1-3.8.1
    • libhdf5_fortran_1_10_1-gnu-mvapich2-hpc-debuginfo-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-mvapich2-hpc-1.10.1-3.8.1
    • libhdf5_fortran-gnu-mvapich2-hpc-1.10.1-3.8.1
    • libhdf5_hl_cpp100-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-mvapich2-hpc-devel-debuginfo-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-openmpi1-hpc-1.10.1-3.8.1
    • libhdf5-gnu-openmpi1-hpc-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-hpc-devel-static-1.10.1-3.8.1
    • libhdf5_1_10_1-gnu-openmpi1-hpc-1.10.1-3.8.1
    • libhdf5_cpp101-debuginfo-1.10.1-3.8.1
    • libhdf5_fortran-gnu-openmpi1-hpc-1.10.1-3.8.1
    • libhdf5_1_10_1-gnu-hpc-1.10.1-3.8.1
    • hdf5-debugsource-1.10.1-3.8.1
    • libhdf5_hl_1_10_1-gnu-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5_hl_cpp-gnu-hpc-1.10.1-3.8.1
    • libhdf5_fortran_1_10_1-gnu-openmpi1-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5hl_fortran_1_10_1-gnu-hpc-1.10.1-3.8.1
    • libhdf5hl_fortran_1_10_1-gnu-mvapich2-hpc-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-hpc-devel-1.10.1-3.8.1
    • libhdf5_hl-gnu-hpc-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-hpc-debugsource-1.10.1-3.8.1
    • libhdf5_cpp_1_10_1-gnu-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5-101-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-openmpi1-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5_hl_fortran-gnu-hpc-1.10.1-3.8.1
    • libhdf5_hl-gnu-openmpi1-hpc-1.10.1-3.8.1
    • libhdf5_fortran-gnu-hpc-1.10.1-3.8.1
    • libhdf5hl_fortran100-debuginfo-1.10.1-3.8.1
    • libhdf5_hl_cpp100-debuginfo-1.10.1-3.8.1
    • libhdf5_cpp_1_10_1-gnu-hpc-1.10.1-3.8.1
    • libhdf5-101-debuginfo-1.10.1-3.8.1
    • hdf5-devel-1.10.1-3.8.1
    • libhdf5_1_10_1-gnu-openmpi1-hpc-debuginfo-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-mvapich2-hpc-debugsource-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-openmpi1-hpc-devel-debuginfo-1.10.1-3.8.1
    • libhdf5_hl100-1.10.1-3.8.1
    • libhdf5_fortran_1_10_1-gnu-mvapich2-hpc-1.10.1-3.8.1
    • libhdf5-gnu-mvapich2-hpc-1.10.1-3.8.1
    • libhdf5_hl_1_10_1-gnu-mvapich2-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5_hl_fortran-gnu-mvapich2-hpc-1.10.1-3.8.1
    • libhdf5_hl_1_10_1-gnu-mvapich2-hpc-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-openmpi1-hpc-devel-static-1.10.1-3.8.1
    • libhdf5_fortran100-debuginfo-1.10.1-3.8.1
    • libhdf5hl_fortran_1_10_1-gnu-mvapich2-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5hl_fortran_1_10_1-gnu-openmpi1-hpc-1.10.1-3.8.1
    • hdf5-devel-data-1.10.1-3.8.1
    • libhdf5hl_fortran100-1.10.1-3.8.1
    • libhdf5_cpp101-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-hpc-devel-debuginfo-1.10.1-3.8.1
    • libhdf5_cpp-gnu-hpc-1.10.1-3.8.1
    • libhdf5_hl_cpp_1_10_1-gnu-hpc-1.10.1-3.8.1
    • hdf5-examples-1.10.1-3.8.1
    • libhdf5_1_10_1-gnu-hpc-debuginfo-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-mvapich2-hpc-devel-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-openmpi1-hpc-debugsource-1.10.1-3.8.1
    • libhdf5_fortran100-1.10.1-3.8.1
    • libhdf5_hl_1_10_1-gnu-openmpi1-hpc-1.10.1-3.8.1
    • libhdf5_hl_cpp_1_10_1-gnu-hpc-debuginfo-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-mvapich2-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5_hl100-debuginfo-1.10.1-3.8.1
    • libhdf5_fortran_1_10_1-gnu-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5-gnu-hpc-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5_1_10_1-gnu-mvapich2-hpc-1.10.1-3.8.1
    • hdf5-devel-static-1.10.1-3.8.1
    • libhdf5_1_10_1-gnu-mvapich2-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5_hl-gnu-mvapich2-hpc-1.10.1-3.8.1
    • libhdf5_hl_1_10_1-gnu-hpc-1.10.1-3.8.1
    • hdf5-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-mvapich2-hpc-devel-static-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-openmpi1-hpc-devel-1.10.1-3.8.1
    • libhdf5_fortran_1_10_1-gnu-openmpi1-hpc-1.10.1-3.8.1
    • libhdf5_hl_1_10_1-gnu-openmpi1-hpc-debuginfo-1.10.1-3.8.1
    • libhdf5_hl_fortran-gnu-openmpi1-hpc-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-hpc-1.10.1-3.8.1
    • libhdf5_fortran_1_10_1-gnu-hpc-1.10.1-3.8.1
  • HPC Module 12 (noarch)
    • hdf5-gnu-mvapich2-hpc-devel-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-hpc-module-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-openmpi1-hpc-module-1.10.1-3.8.1
    • hdf5_1_10_1-gnu-mvapich2-hpc-module-1.10.1-3.8.1
    • hdf5-gnu-hpc-devel-1.10.1-3.8.1
    • hdf5-gnu-openmpi1-hpc-devel-1.10.1-3.8.1

References: